Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC021087.4-201ENST00000563761 564 ntBASIC15.91■□□□□ 0.14
RNF6Q9Y252 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF6Q9Y252 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.91■□□□□ 0.14
RNF6Q9Y252 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RNF6Q9Y252 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RNF6Q9Y252 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNF6Q9Y252 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF6Q9Y252 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF6Q9Y252 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF6Q9Y252 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RNF6Q9Y252 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF6Q9Y252 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF6Q9Y252 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF6Q9Y252 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF6Q9Y252 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF6Q9Y252 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF6Q9Y252 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF6Q9Y252 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF6Q9Y252 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 AL662844.4-201ENST00000606367 2838 ntBASIC15.9■□□□□ 0.14
RNF6Q9Y252 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 MIR1233-2-201ENST00000408138 82 ntBASIC15.9■□□□□ 0.14
RNF6Q9Y252 MIR1233-1-201ENST00000408722 82 ntBASIC15.9■□□□□ 0.14
RNF6Q9Y252 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF6Q9Y252 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF6Q9Y252 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 RPS2P1-201ENST00000434010 821 ntBASIC15.89■□□□□ 0.13
RNF6Q9Y252 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 AL356309.3-201ENST00000624132 1934 ntBASIC15.89■□□□□ 0.13
RNF6Q9Y252 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF6Q9Y252 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF6Q9Y252 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms