Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC26.1■■□□□ 1.77
RIMBP3Q9UFD9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC26.1■■□□□ 1.77
RIMBP3Q9UFD9 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC26.1■■□□□ 1.77
RIMBP3Q9UFD9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC26.1■■□□□ 1.77
RIMBP3Q9UFD9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC26.1■■□□□ 1.77
RIMBP3Q9UFD9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RIMBP3Q9UFD9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RIMBP3Q9UFD9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RIMBP3Q9UFD9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RIMBP3Q9UFD9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 AC023310.1-201ENST00000554836 735 ntBASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 AC005252.2-201ENST00000624630 1141 ntBASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RIMBP3Q9UFD9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 AC016700.1-201ENST00000429424 312 ntBASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 HIST3H2BA-201ENST00000436555 524 ntBASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 AC104982.3-201ENST00000581995 514 ntBASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
RIMBP3Q9UFD9 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
RIMBP3Q9UFD9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 MIR1227-201ENST00000408484 88 ntBASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 SIGLEC29P-201ENST00000599873 1114 ntBASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RIMBP3Q9UFD9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 FAM86LP-201ENST00000478302 853 ntBASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 MIR3147-201ENST00000577811 66 ntBASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 AL139011.1-202ENST00000642063 584 ntBASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 CFL1-206ENST00000527344 962 ntTSL 2 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 AC120045.2-201ENST00000567334 178 ntBASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIMBP3Q9UFD9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms