Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 TTTY23B-201ENST00000442790 549 ntBASIC16.62■□□□□ 0.25
NCDNQ9UBB6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 AC135586.1-201ENST00000539323 574 ntBASIC16.62■□□□□ 0.25
NCDNQ9UBB6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 AC133552.6-201ENST00000613406 534 ntBASIC16.62■□□□□ 0.25
NCDNQ9UBB6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NCDNQ9UBB6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 CETN4P-206ENST00000642099 2168 ntBASIC16.61■□□□□ 0.25
NCDNQ9UBB6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 GNAQP1-201ENST00000444815 1067 ntBASIC16.61■□□□□ 0.25
NCDNQ9UBB6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.61■□□□□ 0.25
NCDNQ9UBB6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 AL035456.1-201ENST00000456064 1369 ntBASIC16.61■□□□□ 0.25
NCDNQ9UBB6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCDNQ9UBB6 AC067852.2-201ENST00000590513 2313 ntBASIC16.61■□□□□ 0.25
NCDNQ9UBB6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AP3S2-216ENST00000617003 1561 ntBASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AC016027.1-202ENST00000607927 1699 ntBASIC16.6■□□□□ 0.25
NCDNQ9UBB6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 MTND6P24-201ENST00000440466 518 ntBASIC16.6■□□□□ 0.25
NCDNQ9UBB6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms