Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.22■□□□□ 0.67
FBXO28Q9NVF7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FBXO28Q9NVF7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FBXO28Q9NVF7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.22■□□□□ 0.67
FBXO28Q9NVF7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 TSPY16P-201ENST00000449843 468 ntBASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 PRYP6-201ENST00000514804 343 ntBASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
FBXO28Q9NVF7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 AC060834.1-201ENST00000443027 2032 ntBASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 AC002472.2-201ENST00000442739 958 ntBASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 AC018529.1-201ENST00000613063 361 ntBASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FBXO28Q9NVF7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AC073439.1-201ENST00000624121 1774 ntBASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AC003101.2-201ENST00000612557 442 ntBASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FBXO28Q9NVF7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms