Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 AC007191.1-201ENST00000623179 2995 ntBASIC13.68□□□□□ -0.22
NKX6-2Q9C056 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 AC099343.3-201ENST00000605834 2503 ntBASIC13.68□□□□□ -0.22
NKX6-2Q9C056 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 AC124016.1-201ENST00000609552 612 ntBASIC13.67□□□□□ -0.22
NKX6-2Q9C056 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 HLA-A-202ENST00000376806 1854 ntBASIC13.67□□□□□ -0.22
NKX6-2Q9C056 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 AC097376.2-205ENST00000610159 5334 ntBASIC13.67□□□□□ -0.22
NKX6-2Q9C056 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-2Q9C056 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 AC004817.3-201ENST00000602957 2129 ntBASIC13.66□□□□□ -0.22
NKX6-2Q9C056 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 AC073195.1-201ENST00000607241 877 ntBASIC13.66□□□□□ -0.22
NKX6-2Q9C056 DGCR10-201ENST00000609839 495 ntBASIC13.66□□□□□ -0.22
NKX6-2Q9C056 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-2Q9C056 AC132938.6-201ENST00000623828 1655 ntBASIC13.66□□□□□ -0.22
NKX6-2Q9C056 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-2Q9C056 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms