Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.7■□□□□ 0.26
COL25A1Q9BXS0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL25A1Q9BXS0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.7■□□□□ 0.26
COL25A1Q9BXS0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 SLC25A24-204ENST00000569674 2357 ntBASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 AL391069.4-201ENST00000609583 481 ntBASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 AL139011.1-202ENST00000642063 584 ntBASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 AC015818.8-201ENST00000587907 1519 ntBASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL25A1Q9BXS0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 RPSAP31-201ENST00000416648 895 ntBASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 AC007274.2-201ENST00000421675 662 ntBASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 AL157792.1-201ENST00000488281 530 ntBASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 RN7SL596P-201ENST00000582123 288 ntBASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 AC010503.4-201ENST00000615487 688 ntBASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 AC138649.2-201ENST00000615886 705 ntBASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COL25A1Q9BXS0 AC025271.4-201ENST00000621477 1726 ntBASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 AL139008.1-201ENST00000437894 228 ntBASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 RN7SL181P-201ENST00000462921 277 ntBASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.67■□□□□ 0.26
COL25A1Q9BXS0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms