Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 PMPCAP1-201ENST00000508114 1576 ntBASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 AL135999.2-201ENST00000622438 1686 ntBASIC13.44□□□□□ -0.26
CHRDL1Q9BU40 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 MIR5100-201ENST00000579544 119 ntBASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 LINC02012-201ENST00000608206 1725 ntBASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 AC092053.1-201ENST00000605787 1936 ntBASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRDL1Q9BU40 FLJ38576-201ENST00000623820 2459 ntBASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRDL1Q9BU40 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms