Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 PAUPAR-201ENST00000630360 2965 ntBASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERPUD2Q9BSE4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 PI4KAP1-204ENST00000612579 1703 ntBASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 AC079781.3-201ENST00000449110 356 ntBASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 AC104692.2-201ENST00000603054 253 ntBASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HERPUD2Q9BSE4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 AC073621.1-201ENST00000392730 636 ntBASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 KRT18P27-201ENST00000427733 1299 ntBASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 AL805961.1-202ENST00000641562 540 ntBASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
HERPUD2Q9BSE4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms