Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 REXO1L6P-202ENST00000619970 1078 ntBASIC12.32□□□□□ -0.44
MUC4Q99102 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
MUC4Q99102 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 AL513523.2-202ENST00000427283 2040 ntBASIC12.32□□□□□ -0.44
MUC4Q99102 AL590787.1-201ENST00000568856 1315 ntBASIC12.32□□□□□ -0.44
MUC4Q99102 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 MTHFR-217ENST00000641820 1569 ntBASIC12.32□□□□□ -0.44
MUC4Q99102 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.32□□□□□ -0.44
MUC4Q99102 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
MUC4Q99102 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.32□□□□□ -0.44
MUC4Q99102 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
MUC4Q99102 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.32□□□□□ -0.44
MUC4Q99102 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.32□□□□□ -0.44
MUC4Q99102 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.32□□□□□ -0.44
MUC4Q99102 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.32□□□□□ -0.44
MUC4Q99102 AL773604.1-201ENST00000617417 272 ntBASIC12.32□□□□□ -0.44
MUC4Q99102 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.32□□□□□ -0.44
MUC4Q99102 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.32□□□□□ -0.44
MUC4Q99102 AC007950.2-201ENST00000615045 2347 ntBASIC12.32□□□□□ -0.44
MUC4Q99102 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
MUC4Q99102 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
MUC4Q99102 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 PAUPAR-201ENST00000630360 2965 ntBASIC12.31□□□□□ -0.44
MUC4Q99102 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 RNA5SP419-201ENST00000515908 135 ntBASIC12.31□□□□□ -0.44
MUC4Q99102 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.31□□□□□ -0.44
MUC4Q99102 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MUC4Q99102 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.31□□□□□ -0.44
MUC4Q99102 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MUC4Q99102 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MUC4Q99102 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MUC4Q99102 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MUC4Q99102 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MUC4Q99102 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.3□□□□□ -0.44
MUC4Q99102 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.3□□□□□ -0.44
MUC4Q99102 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.3□□□□□ -0.44
MUC4Q99102 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.3□□□□□ -0.44
MUC4Q99102 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
MUC4Q99102 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MUC4Q99102 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.3□□□□□ -0.44
MUC4Q99102 AL139288.1-201ENST00000623748 933 ntBASIC12.3□□□□□ -0.44
MUC4Q99102 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
MUC4Q99102 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MUC4Q99102 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MUC4Q99102 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.3□□□□□ -0.44
MUC4Q99102 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
MUC4Q99102 AC097637.2-201ENST00000624096 1997 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms