Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 TFAMP1-201ENST00000412727 736 ntBASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 SPDYE11-202ENST00000450699 704 ntBASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 TIMM8BP1-201ENST00000452384 211 ntBASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 AL135744.1-201ENST00000565098 629 ntBASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 SPDYE9P-201ENST00000570642 692 ntBASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 AL596442.2-201ENST00000610240 980 ntBASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 SPDYE10P-202ENST00000612005 668 ntBASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 SPDYE8P-202ENST00000612377 668 ntBASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 AC105339.1-204ENST00000636249 355 ntBASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 CNN2P11-201ENST00000429351 262 ntBASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.62■□□□□ 0.41
SMARCD1Q96GM5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 AC022145.2-201ENST00000598203 171 ntBASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.61■□□□□ 0.41
SMARCD1Q96GM5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms