Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM11Q96F44 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM11Q96F44 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 AC131009.4-201ENST00000624048 1740 ntBASIC17.78■□□□□ 0.44
TRIM11Q96F44 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 MIR1199-201ENST00000621445 119 ntBASIC17.78■□□□□ 0.44
TRIM11Q96F44 AC012313.10-201ENST00000623509 926 ntBASIC17.78■□□□□ 0.44
TRIM11Q96F44 AP001350.2-201ENST00000625104 1094 ntBASIC17.78■□□□□ 0.44
TRIM11Q96F44 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 DOC2GP-204ENST00000639052 2548 ntBASIC17.78■□□□□ 0.44
TRIM11Q96F44 ME2P1-201ENST00000426028 1970 ntBASIC17.78■□□□□ 0.44
TRIM11Q96F44 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 KRT8P39-201ENST00000396270 1433 ntBASIC17.78■□□□□ 0.44
TRIM11Q96F44 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM11Q96F44 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM11Q96F44 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM11Q96F44 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM11Q96F44 AC129492.6-201ENST00000611383 1305 ntBASIC17.77■□□□□ 0.44
TRIM11Q96F44 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM11Q96F44 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM11Q96F44 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM11Q96F44 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM11Q96F44 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM11Q96F44 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM11Q96F44 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM11Q96F44 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM11Q96F44 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM11Q96F44 KRT18P56-201ENST00000507275 550 ntBASIC17.77■□□□□ 0.44
TRIM11Q96F44 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.77■□□□□ 0.44
TRIM11Q96F44 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM11Q96F44 AC005412.3-201ENST00000580309 715 ntBASIC17.77■□□□□ 0.44
TRIM11Q96F44 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM11Q96F44 PGM5P2-202ENST00000637225 1043 ntBASIC17.77■□□□□ 0.44
TRIM11Q96F44 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRIM11Q96F44 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM11Q96F44 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM11Q96F44 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM11Q96F44 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM11Q96F44 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TRIM11Q96F44 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.77■□□□□ 0.43
TRIM11Q96F44 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
TRIM11Q96F44 GGT3P-204ENST00000453783 1664 ntBASIC17.77■□□□□ 0.43
TRIM11Q96F44 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.77■□□□□ 0.43
TRIM11Q96F44 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM11Q96F44 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM11Q96F44 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TRIM11Q96F44 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM11Q96F44 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM11Q96F44 TNRC18P3-201ENST00000441896 2691 ntBASIC17.76■□□□□ 0.43
TRIM11Q96F44 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 SNX33P1-201ENST00000592116 1762 ntBASIC17.76■□□□□ 0.43
TRIM11Q96F44 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 AC073621.1-201ENST00000392730 636 ntBASIC17.76■□□□□ 0.43
TRIM11Q96F44 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 RPS2P1-201ENST00000434010 821 ntBASIC17.76■□□□□ 0.43
TRIM11Q96F44 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 AC008667.4-201ENST00000607370 168 ntBASIC17.76■□□□□ 0.43
TRIM11Q96F44 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 AC008735.5-201ENST00000623544 497 ntBASIC17.76■□□□□ 0.43
TRIM11Q96F44 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms