Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 AL139327.4-201ENST00000612362 153 ntBASIC17.74■□□□□ 0.43
ATP2A3Q93084 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A3Q93084 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 AC011676.5-201ENST00000624864 2660 ntBASIC17.74■□□□□ 0.43
ATP2A3Q93084 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ATP2A3Q93084 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 FAM58CP-201ENST00000435741 640 ntBASIC17.73■□□□□ 0.43
ATP2A3Q93084 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP2A3Q93084 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A3Q93084 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 AC124067.4-201ENST00000519691 2379 ntBASIC17.72■□□□□ 0.43
ATP2A3Q93084 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 HMGN1P19-201ENST00000436976 333 ntBASIC17.72■□□□□ 0.43
ATP2A3Q93084 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A3Q93084 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATP2A3Q93084 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms