Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 AC068587.3-201ENST00000526613 355 ntBASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 CLK3P2-201ENST00000427566 1453 ntBASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ALMS1Q8TCU4 AC108860.2-201ENST00000562760 2183 ntBASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 AC091046.1-201ENST00000331871 207 ntBASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 RN7SL190P-201ENST00000582519 257 ntBASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 HIST3H2BA-201ENST00000436555 524 ntBASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 ACTG1P17-201ENST00000558391 1119 ntBASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 AC005702.4-201ENST00000618393 416 ntBASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 KRT8P22-201ENST00000562317 1415 ntBASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.1□□□□□ -0.63
ALMS1Q8TCU4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms