Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CROCCP3-202ENST00000420820 1947 ntBASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 AC135776.1-201ENST00000319817 2481 ntBASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 AC090142.2-201ENST00000483263 416 ntBASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 API5-211ENST00000534695 560 ntTSL 5 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 AL139327.4-201ENST00000612362 153 ntBASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 REXO1L9P-201ENST00000604264 2108 ntBASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 AC090164.3-201ENST00000610780 2143 ntBASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNIP1Q8TAD8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 AL606495.2-201ENST00000605867 535 ntBASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 MIR6805-201ENST00000615055 62 ntBASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SNIP1Q8TAD8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 AC007541.1-201ENST00000570282 1469 ntBASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms