Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TUBB8P12-201ENST00000308911 1335 ntBASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 TUBB7P-202ENST00000428444 1305 ntBASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 TUBB8P7-204ENST00000567960 1332 ntBASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 RNF216P1-203ENST00000404404 2427 ntBASIC13.98□□□□□ -0.17
ZNF439Q8NDP4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 AL118508.1-201ENST00000613502 2345 ntBASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 FLJ38576-201ENST00000623820 2459 ntBASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 AF238378.1-201ENST00000526806 358 ntBASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 MTDHP4-201ENST00000600287 670 ntBASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 IFNL4P1-201ENST00000607083 540 ntBASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF439Q8NDP4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms