Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 AP002472.1-201ENST00000577490 586 ntBASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC4Q8N9L1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
ZIC4Q8N9L1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.83□□□□□ -0.03
ZIC4Q8N9L1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.83□□□□□ -0.03
ZIC4Q8N9L1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZIC4Q8N9L1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ZIC4Q8N9L1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 AC004832.2-201ENST00000426397 482 ntBASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 AL031055.1-201ENST00000606362 631 ntBASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC4Q8N9L1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.82□□□□□ -0.04
ZIC4Q8N9L1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms