Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 RPSAP43-201ENST00000402237 625 ntBASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 MIR1233-2-201ENST00000408138 82 ntBASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 MIR1233-1-201ENST00000408722 82 ntBASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 AC074386.1-202ENST00000463561 864 ntBASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 AC010327.4-202ENST00000591484 748 ntBASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 AC006538.3-201ENST00000612495 578 ntBASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 AL645728.2-201ENST00000641974 660 ntBASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 AC091167.2-201ENST00000579581 588 ntBASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 GPALPP1-207ENST00000611650 899 ntBASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 AL353732.1-201ENST00000569618 1459 ntBASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH20Q8N6Y1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 KRT8P49-201ENST00000604166 1432 ntBASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms