Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 CLK3P2-201ENST00000427566 1453 ntBASIC20.15■□□□□ 0.82
SLX4Q8IY92 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
SLX4Q8IY92 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
SLX4Q8IY92 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.14■□□□□ 0.82
SLX4Q8IY92 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
SLX4Q8IY92 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.14■□□□□ 0.82
SLX4Q8IY92 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLX4Q8IY92 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.14■□□□□ 0.81
SLX4Q8IY92 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 AC104989.1-201ENST00000519711 778 ntBASIC20.13■□□□□ 0.81
SLX4Q8IY92 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 SPDYE17-201ENST00000412399 783 ntBASIC20.13■□□□□ 0.81
SLX4Q8IY92 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 AC133552.6-201ENST00000613406 534 ntBASIC20.13■□□□□ 0.81
SLX4Q8IY92 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SLX4Q8IY92 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLX4Q8IY92 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.12■□□□□ 0.81
SLX4Q8IY92 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SLX4Q8IY92 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 RRP7BP-205ENST00000566851 833 ntBASIC20.12■□□□□ 0.81
SLX4Q8IY92 AC008764.6-201ENST00000595909 2069 ntBASIC20.12■□□□□ 0.81
SLX4Q8IY92 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SLX4Q8IY92 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.12■□□□□ 0.81
SLX4Q8IY92 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SLX4Q8IY92 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLX4Q8IY92 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SLX4Q8IY92 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLX4Q8IY92 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLX4Q8IY92 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLX4Q8IY92 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLX4Q8IY92 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLX4Q8IY92 SDHAP3-202ENST00000515467 728 ntBASIC20.11■□□□□ 0.81
SLX4Q8IY92 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.11■□□□□ 0.81
SLX4Q8IY92 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SLX4Q8IY92 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLX4Q8IY92 PKD1P6-201ENST00000343738 4769 ntBASIC20.11■□□□□ 0.81
SLX4Q8IY92 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLX4Q8IY92 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms