Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 COX5BP8-201ENST00000416911 349 ntBASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 AC069120.2-201ENST00000524091 540 ntBASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RP1L1Q8IWN7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 AL133373.2-201ENST00000623187 2828 ntBASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 RPS2P32-201ENST00000439199 892 ntBASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 MIR6080-201ENST00000617359 66 ntBASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RP1L1Q8IWN7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 AL353779.1-201ENST00000434793 351 ntBASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
RP1L1Q8IWN7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 DGCR5-201ENST00000399539 862 ntBASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 AL161645.1-201ENST00000622716 1255 ntBASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms