Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 AC002558.1-201ENST00000488906 803 ntBASIC15.81■□□□□ 0.12
CCDC71Q8IV32 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 AC027601.4-201ENST00000611259 610 ntBASIC15.81■□□□□ 0.12
CCDC71Q8IV32 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 PAUPAR-201ENST00000630360 2965 ntBASIC15.8■□□□□ 0.12
CCDC71Q8IV32 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 RNA5SP415-201ENST00000517246 115 ntBASIC15.8■□□□□ 0.12
CCDC71Q8IV32 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AC145285.3-201ENST00000564603 959 ntBASIC15.8■□□□□ 0.12
CCDC71Q8IV32 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 MTDHP4-201ENST00000600287 670 ntBASIC15.8■□□□□ 0.12
CCDC71Q8IV32 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AL356488.2-201ENST00000602755 427 ntBASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AC140113.2-201ENST00000604370 208 ntBASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AL139288.1-201ENST00000623748 933 ntBASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AC105917.1-201ENST00000506637 2539 ntBASIC15.8■□□□□ 0.12
CCDC71Q8IV32 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC71Q8IV32 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 AC024909.3-201ENST00000611513 2257 ntBASIC15.79■□□□□ 0.12
CCDC71Q8IV32 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms