Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC022898.2-201ENST00000616822 1312 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 AC139530.3-201ENST00000620344 690 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 PCDHB19P-201ENST00000570871 2371 ntBASIC11.21□□□□□ -0.61
SCXQ7RTU7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 AC096633.1-201ENST00000422446 749 ntBASIC11.21□□□□□ -0.61
SCXQ7RTU7 LAGE3P1-201ENST00000425356 484 ntBASIC11.21□□□□□ -0.61
SCXQ7RTU7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 AC145285.3-201ENST00000564603 959 ntBASIC11.21□□□□□ -0.61
SCXQ7RTU7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 AC027601.4-201ENST00000611259 610 ntBASIC11.21□□□□□ -0.61
SCXQ7RTU7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 AC107918.4-202ENST00000641623 219 ntBASIC11.21□□□□□ -0.61
SCXQ7RTU7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC11.21□□□□□ -0.61
SCXQ7RTU7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCXQ7RTU7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCXQ7RTU7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCXQ7RTU7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCXQ7RTU7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCXQ7RTU7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCXQ7RTU7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC11.21□□□□□ -0.62
SCXQ7RTU7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.21□□□□□ -0.62
SCXQ7RTU7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCXQ7RTU7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCXQ7RTU7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCXQ7RTU7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCXQ7RTU7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.21□□□□□ -0.62
SCXQ7RTU7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.21□□□□□ -0.62
SCXQ7RTU7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
SCXQ7RTU7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SCXQ7RTU7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SCXQ7RTU7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 AC079776.2-201ENST00000641154 1609 ntBASIC11.2□□□□□ -0.62
SCXQ7RTU7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms