Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 AC018712.1-201ENST00000455767 687 ntBASIC18.95■□□□□ 0.62
SHC4Q6S5L8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 CYP2A7P1-201ENST00000595391 815 ntBASIC18.95■□□□□ 0.62
SHC4Q6S5L8 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.95■□□□□ 0.62
SHC4Q6S5L8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
SHC4Q6S5L8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 AC136632.2-201ENST00000512891 861 ntBASIC18.94■□□□□ 0.62
SHC4Q6S5L8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 AC008667.4-201ENST00000607370 168 ntBASIC18.94■□□□□ 0.62
SHC4Q6S5L8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHC4Q6S5L8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 AC046158.3-201ENST00000624947 2558 ntBASIC18.93■□□□□ 0.62
SHC4Q6S5L8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 AL353732.1-201ENST00000569618 1459 ntBASIC18.93■□□□□ 0.62
SHC4Q6S5L8 AP002414.3-201ENST00000589352 1468 ntBASIC18.93■□□□□ 0.62
SHC4Q6S5L8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 AC073648.2-201ENST00000510116 352 ntBASIC18.93■□□□□ 0.62
SHC4Q6S5L8 IGHV3-65-201ENST00000523210 341 ntBASIC18.93■□□□□ 0.62
SHC4Q6S5L8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 AC008735.5-201ENST00000623544 497 ntBASIC18.93■□□□□ 0.62
SHC4Q6S5L8 AC148477.8-201ENST00000624298 468 ntBASIC18.93■□□□□ 0.62
SHC4Q6S5L8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.93■□□□□ 0.62
SHC4Q6S5L8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SHC4Q6S5L8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHC4Q6S5L8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms