Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 AC021087.4-201ENST00000563761 564 ntBASIC15.35■□□□□ 0.05
NIPAL3Q6P499 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 TUBB8P12-201ENST00000308911 1335 ntBASIC15.35■□□□□ 0.05
NIPAL3Q6P499 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 TUBB7P-202ENST00000428444 1305 ntBASIC15.35■□□□□ 0.05
NIPAL3Q6P499 TUBB8P7-204ENST00000567960 1332 ntBASIC15.35■□□□□ 0.05
NIPAL3Q6P499 AL645728.1-201ENST00000366221 2101 ntBASIC15.35■□□□□ 0.05
NIPAL3Q6P499 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 AL391256.1-201ENST00000443260 1855 ntBASIC15.35■□□□□ 0.05
NIPAL3Q6P499 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 NCF1C-201ENST00000438382 1427 ntBASIC15.34■□□□□ 0.05
NIPAL3Q6P499 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 LINC00982-205ENST00000420957 435 ntBASIC15.34■□□□□ 0.05
NIPAL3Q6P499 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 ACTG1P4-201ENST00000425123 1122 ntBASIC15.34■□□□□ 0.05
NIPAL3Q6P499 TPM4P1-201ENST00000436100 807 ntBASIC15.34■□□□□ 0.05
NIPAL3Q6P499 FAM197Y8-203ENST00000450145 560 ntBASIC15.34■□□□□ 0.05
NIPAL3Q6P499 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 AC064862.7-201ENST00000604520 867 ntBASIC15.34■□□□□ 0.05
NIPAL3Q6P499 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 AL031008.1-201ENST00000619963 541 ntBASIC15.34■□□□□ 0.05
NIPAL3Q6P499 TP73-AS1-207ENST00000624167 988 ntBASIC15.34■□□□□ 0.05
NIPAL3Q6P499 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL3Q6P499 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL3Q6P499 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL3Q6P499 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
NIPAL3Q6P499 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NIPAL3Q6P499 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.33■□□□□ 0.05
NIPAL3Q6P499 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NIPAL3Q6P499 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL3Q6P499 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.33■□□□□ 0.05
NIPAL3Q6P499 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL3Q6P499 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms