Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 AL391825.1-201ENST00000457671 1364 ntBASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 HILS1-202ENST00000545329 423 ntBASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 AL079307.3-201ENST00000556114 283 ntBASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 AC104794.3-201ENST00000566840 1248 ntBASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 PKD1P1-201ENST00000458669 6805 ntBASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 AC108860.2-201ENST00000562760 2183 ntBASIC16.36■□□□□ 0.21
LYSMD4Q5XG99 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 AC116353.5-201ENST00000638148 1699 ntBASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 AL080243.2-201ENST00000418783 582 ntBASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 GNAQP1-201ENST00000444815 1067 ntBASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 INE1-201ENST00000456273 945 ntBASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 RN7SL752P-201ENST00000463779 287 ntBASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 RN7SL618P-201ENST00000477850 296 ntBASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 BANF1P1-201ENST00000553684 263 ntBASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD4Q5XG99 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD4Q5XG99 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms