Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 AL671277.1-201ENST00000429656 993 ntBASIC19.56■□□□□ 0.72
CCDC96Q2M329 ADH5P3-201ENST00000433842 1137 ntBASIC19.56■□□□□ 0.72
CCDC96Q2M329 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC96Q2M329 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 AL009183.1-201ENST00000603760 355 ntBASIC19.56■□□□□ 0.72
CCDC96Q2M329 AL513210.1-201ENST00000629608 234 ntBASIC19.56■□□□□ 0.72
CCDC96Q2M329 AC105339.1-204ENST00000636249 355 ntBASIC19.56■□□□□ 0.72
CCDC96Q2M329 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC96Q2M329 AL645608.8-201ENST00000606034 2086 ntBASIC19.56■□□□□ 0.72
CCDC96Q2M329 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC96Q2M329 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC96Q2M329 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC96Q2M329 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC96Q2M329 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC96Q2M329 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC96Q2M329 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 KRT18P28-201ENST00000453838 1332 ntBASIC19.55■□□□□ 0.72
CCDC96Q2M329 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 AL121761.2-201ENST00000598007 1648 ntBASIC19.55■□□□□ 0.72
CCDC96Q2M329 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 RNU1-129P-201ENST00000384064 167 ntBASIC19.55■□□□□ 0.72
CCDC96Q2M329 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 AC004461.1-201ENST00000412461 403 ntBASIC19.55■□□□□ 0.72
CCDC96Q2M329 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 AC108860.2-201ENST00000562760 2183 ntBASIC19.55■□□□□ 0.72
CCDC96Q2M329 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 U1.21-201ENST00000580816 167 ntBASIC19.55■□□□□ 0.72
CCDC96Q2M329 CYP2A7P1-201ENST00000595391 815 ntBASIC19.55■□□□□ 0.72
CCDC96Q2M329 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 AC022145.2-201ENST00000598203 171 ntBASIC19.55■□□□□ 0.72
CCDC96Q2M329 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 AC027612.4-201ENST00000605371 583 ntBASIC19.55■□□□□ 0.72
CCDC96Q2M329 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC96Q2M329 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
CCDC96Q2M329 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 PMS2P2-201ENST00000425039 1128 ntBASIC19.54■□□□□ 0.72
CCDC96Q2M329 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 SPDYE11-202ENST00000450699 704 ntBASIC19.54■□□□□ 0.72
CCDC96Q2M329 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 SPDYE9P-201ENST00000570642 692 ntBASIC19.54■□□□□ 0.72
CCDC96Q2M329 AC004835.2-201ENST00000603762 682 ntBASIC19.54■□□□□ 0.72
CCDC96Q2M329 SPDYE10P-202ENST00000612005 668 ntBASIC19.54■□□□□ 0.72
CCDC96Q2M329 SPDYE8P-202ENST00000612377 668 ntBASIC19.54■□□□□ 0.72
CCDC96Q2M329 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC96Q2M329 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC96Q2M329 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC96Q2M329 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC96Q2M329 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC96Q2M329 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms