Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.31□□□□□ -0.12
EFNB3Q15768 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNB3Q15768 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
EFNB3Q15768 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
EFNB3Q15768 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNB3Q15768 AL023806.1-201ENST00000603994 1649 ntBASIC14.31□□□□□ -0.12
EFNB3Q15768 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNB3Q15768 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.31□□□□□ -0.12
EFNB3Q15768 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.31□□□□□ -0.12
EFNB3Q15768 TSEN15P1-201ENST00000423257 515 ntBASIC14.31□□□□□ -0.12
EFNB3Q15768 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNB3Q15768 AC023141.5-201ENST00000458585 616 ntBASIC14.31□□□□□ -0.12
EFNB3Q15768 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
EFNB3Q15768 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
EFNB3Q15768 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.31□□□□□ -0.12
EFNB3Q15768 AL135744.1-201ENST00000565098 629 ntBASIC14.31□□□□□ -0.12
EFNB3Q15768 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.31□□□□□ -0.12
EFNB3Q15768 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
EFNB3Q15768 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
EFNB3Q15768 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
EFNB3Q15768 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
EFNB3Q15768 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNB3Q15768 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
EFNB3Q15768 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.31□□□□□ -0.12
EFNB3Q15768 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.31□□□□□ -0.12
EFNB3Q15768 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
EFNB3Q15768 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 WASH6P-202ENST00000359512 1437 ntBASIC14.31□□□□□ -0.12
EFNB3Q15768 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EFNB3Q15768 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNB3Q15768 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB3Q15768 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
EFNB3Q15768 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EFNB3Q15768 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
EFNB3Q15768 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.3□□□□□ -0.12
EFNB3Q15768 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.3□□□□□ -0.12
EFNB3Q15768 AC079140.1-201ENST00000508039 487 ntBASIC14.3□□□□□ -0.12
EFNB3Q15768 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNB3Q15768 KRT8P48-201ENST00000515599 1220 ntBASIC14.3□□□□□ -0.12
EFNB3Q15768 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNB3Q15768 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.3□□□□□ -0.12
EFNB3Q15768 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.3□□□□□ -0.12
EFNB3Q15768 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 AC013467.2-201ENST00000605472 835 ntBASIC14.3□□□□□ -0.12
EFNB3Q15768 AC021097.1-201ENST00000607902 574 ntBASIC14.3□□□□□ -0.12
EFNB3Q15768 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.3□□□□□ -0.12
EFNB3Q15768 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
EFNB3Q15768 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNB3Q15768 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EFNB3Q15768 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNB3Q15768 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms