Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 AL354751.1-201ENST00000412768 1863 ntBASIC20.63■□□□□ 0.89
DDR1Q08345 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
DDR1Q08345 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DDR1Q08345 TPRX2P-201ENST00000535362 881 ntBASIC20.63■□□□□ 0.89
DDR1Q08345 MIR6775-201ENST00000617557 69 ntBASIC20.63■□□□□ 0.89
DDR1Q08345 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.63■□□□□ 0.89
DDR1Q08345 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.63■□□□□ 0.89
DDR1Q08345 AL033527.5-202ENST00000641632 1098 ntBASIC20.63■□□□□ 0.89
DDR1Q08345 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 SNX33P1-201ENST00000592116 1762 ntBASIC20.63■□□□□ 0.89
DDR1Q08345 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
DDR1Q08345 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.63■□□□□ 0.89
DDR1Q08345 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDR1Q08345 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
DDR1Q08345 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
DDR1Q08345 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.62■□□□□ 0.89
DDR1Q08345 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
DDR1Q08345 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
DDR1Q08345 ANKRD19P-201ENST00000338192 862 ntBASIC20.62■□□□□ 0.89
DDR1Q08345 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDR1Q08345 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.62■□□□□ 0.89
DDR1Q08345 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.62■□□□□ 0.89
DDR1Q08345 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.62■□□□□ 0.89
DDR1Q08345 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.62■□□□□ 0.89
DDR1Q08345 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.62■□□□□ 0.89
DDR1Q08345 AC123567.1-201ENST00000548294 1261 ntBASIC20.62■□□□□ 0.89
DDR1Q08345 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.62■□□□□ 0.89
DDR1Q08345 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.62■□□□□ 0.89
DDR1Q08345 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.62■□□□□ 0.89
DDR1Q08345 AC099568.2-201ENST00000609194 695 ntBASIC20.62■□□□□ 0.89
DDR1Q08345 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 COX11-210ENST00000639671 696 ntBASIC20.62■□□□□ 0.89
DDR1Q08345 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDR1Q08345 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
DDR1Q08345 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.61■□□□□ 0.89
DDR1Q08345 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.61■□□□□ 0.89
DDR1Q08345 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.61■□□□□ 0.89
DDR1Q08345 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.61■□□□□ 0.89
DDR1Q08345 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.61■□□□□ 0.89
DDR1Q08345 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.61■□□□□ 0.89
DDR1Q08345 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.61■□□□□ 0.89
DDR1Q08345 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.61■□□□□ 0.89
DDR1Q08345 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.61■□□□□ 0.89
DDR1Q08345 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.61■□□□□ 0.89
DDR1Q08345 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.61■□□□□ 0.89
DDR1Q08345 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
DDR1Q08345 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.61■□□□□ 0.89
DDR1Q08345 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.61■□□□□ 0.89
DDR1Q08345 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDR1Q08345 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.6■□□□□ 0.89
DDR1Q08345 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 KRT8P12-202ENST00000472924 1397 ntBASIC20.6■□□□□ 0.89
DDR1Q08345 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms