Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 AC010460.3-201ENST00000511359 1579 ntBASIC13.28□□□□□ -0.28
CCL20P78556 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL20P78556 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.27□□□□□ -0.28
CCL20P78556 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.27□□□□□ -0.28
CCL20P78556 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.27□□□□□ -0.28
CCL20P78556 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.27□□□□□ -0.28
CCL20P78556 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.27□□□□□ -0.28
CCL20P78556 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.27□□□□□ -0.28
CCL20P78556 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CCL20P78556 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL20P78556 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CCL20P78556 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.27□□□□□ -0.28
CCL20P78556 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 IGHV3-52-201ENST00000519770 353 ntBASIC13.27□□□□□ -0.29
CCL20P78556 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL20P78556 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.27□□□□□ -0.29
CCL20P78556 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL20P78556 AL137784.2-201ENST00000607332 1000 ntBASIC13.27□□□□□ -0.29
CCL20P78556 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL20P78556 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL20P78556 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL20P78556 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CCL20P78556 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL20P78556 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 CDC14C-201ENST00000428251 1719 ntBASIC13.27□□□□□ -0.29
CCL20P78556 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL20P78556 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CCL20P78556 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL20P78556 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL20P78556 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL20P78556 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 ID1-201ENST00000376105 1233 ntBASIC13.26□□□□□ -0.29
CCL20P78556 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
CCL20P78556 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 TSPY12P-201ENST00000421279 868 ntBASIC13.26□□□□□ -0.29
CCL20P78556 SLC25A1P2-201ENST00000430693 912 ntBASIC13.26□□□□□ -0.29
CCL20P78556 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL20P78556 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CCL20P78556 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL20P78556 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL20P78556 SSR4P1-203ENST00000599569 2260 ntBASIC13.26□□□□□ -0.29
CCL20P78556 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CCL20P78556 AC004263.2-201ENST00000617183 678 ntBASIC13.26□□□□□ -0.29
CCL20P78556 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL20P78556 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 AL157888.1-201ENST00000631930 593 ntBASIC13.26□□□□□ -0.29
CCL20P78556 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CCL20P78556 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms