Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 AC073439.1-201ENST00000624121 1774 ntBASIC19■□□□□ 0.63
CCNA1P78396 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCNA1P78396 CU639417.3-201ENST00000624240 1404 ntBASIC19■□□□□ 0.63
CCNA1P78396 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.99■□□□□ 0.63
CCNA1P78396 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNA1P78396 KRT17P7-201ENST00000451704 1104 ntBASIC18.99■□□□□ 0.63
CCNA1P78396 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNA1P78396 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNA1P78396 AC124947.2-201ENST00000547118 1133 ntBASIC18.99■□□□□ 0.63
CCNA1P78396 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNA1P78396 RN7SL828P-201ENST00000607615 303 ntBASIC18.99■□□□□ 0.63
CCNA1P78396 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNA1P78396 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNA1P78396 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.99■□□□□ 0.63
CCNA1P78396 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCNA1P78396 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCNA1P78396 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCNA1P78396 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.98■□□□□ 0.63
CCNA1P78396 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.98■□□□□ 0.63
CCNA1P78396 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.98■□□□□ 0.63
CCNA1P78396 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNA1P78396 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.98■□□□□ 0.63
CCNA1P78396 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.98■□□□□ 0.63
CCNA1P78396 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.98■□□□□ 0.63
CCNA1P78396 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.98■□□□□ 0.63
CCNA1P78396 AL359881.2-201ENST00000602973 570 ntBASIC18.98■□□□□ 0.63
CCNA1P78396 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCNA1P78396 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
CCNA1P78396 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNA1P78396 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
CCNA1P78396 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCNA1P78396 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCNA1P78396 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CCNA1P78396 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCNA1P78396 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CCNA1P78396 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.97■□□□□ 0.63
CCNA1P78396 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.97■□□□□ 0.63
CCNA1P78396 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNA1P78396 RNA5SP410-201ENST00000516285 106 ntBASIC18.97■□□□□ 0.63
CCNA1P78396 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.97■□□□□ 0.63
CCNA1P78396 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.97■□□□□ 0.63
CCNA1P78396 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNA1P78396 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.97■□□□□ 0.63
CCNA1P78396 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNA1P78396 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.97■□□□□ 0.63
CCNA1P78396 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.97■□□□□ 0.63
CCNA1P78396 AL008721.1-201ENST00000609964 604 ntBASIC18.97■□□□□ 0.63
CCNA1P78396 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CCNA1P78396 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNA1P78396 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNA1P78396 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNA1P78396 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCNA1P78396 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNA1P78396 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA1P78396 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNA1P78396 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms