Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.54□□□□□ -0.24
PAX9P55771 AC013268.4-201ENST00000637413 2228 ntBASIC13.54□□□□□ -0.24
PAX9P55771 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.53□□□□□ -0.24
PAX9P55771 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PAX9P55771 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PAX9P55771 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
PAX9P55771 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.53□□□□□ -0.24
PAX9P55771 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 AL137013.1-201ENST00000432946 1228 ntBASIC13.53□□□□□ -0.24
PAX9P55771 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 NUS1P1-201ENST00000446295 882 ntBASIC13.53□□□□□ -0.24
PAX9P55771 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.53□□□□□ -0.24
PAX9P55771 YBX1P2-201ENST00000489612 999 ntBASIC13.53□□□□□ -0.24
PAX9P55771 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
PAX9P55771 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.53□□□□□ -0.24
PAX9P55771 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 AC139887.4-201ENST00000607877 719 ntBASIC13.53□□□□□ -0.24
PAX9P55771 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 AC073592.5-201ENST00000624854 528 ntBASIC13.53□□□□□ -0.24
PAX9P55771 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.53□□□□□ -0.24
PAX9P55771 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX9P55771 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX9P55771 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX9P55771 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
PAX9P55771 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX9P55771 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.52□□□□□ -0.24
PAX9P55771 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PAX9P55771 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX9P55771 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX9P55771 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
PAX9P55771 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
PAX9P55771 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.52□□□□□ -0.24
PAX9P55771 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX9P55771 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX9P55771 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX9P55771 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
PAX9P55771 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.52□□□□□ -0.24
PAX9P55771 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX9P55771 TERF1P1-201ENST00000311003 1181 ntBASIC13.52□□□□□ -0.25
PAX9P55771 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 ACTG1P4-201ENST00000425123 1122 ntBASIC13.52□□□□□ -0.25
PAX9P55771 BX664615.1-201ENST00000443558 458 ntBASIC13.52□□□□□ -0.25
PAX9P55771 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.52□□□□□ -0.25
PAX9P55771 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.52□□□□□ -0.25
PAX9P55771 AC124864.1-201ENST00000623408 392 ntBASIC13.52□□□□□ -0.25
PAX9P55771 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
PAX9P55771 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
PAX9P55771 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.52□□□□□ -0.25
PAX9P55771 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 AL671710.1-201ENST00000610245 2349 ntBASIC13.52□□□□□ -0.25
PAX9P55771 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PAX9P55771 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.52□□□□□ -0.25
PAX9P55771 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
PAX9P55771 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX9P55771 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PAX9P55771 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
PAX9P55771 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms