Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDH12P55289 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDH12P55289 POM121L3P-201ENST00000419331 1163 ntBASIC15.73■□□□□ 0.11
CDH12P55289 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH12P55289 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH12P55289 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.73■□□□□ 0.11
CDH12P55289 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH12P55289 KRT18P35-201ENST00000510488 1269 ntBASIC15.73■□□□□ 0.11
CDH12P55289 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH12P55289 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH12P55289 AC092329.2-201ENST00000598402 547 ntBASIC15.73■□□□□ 0.11
CDH12P55289 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 HYMAI-201ENST00000635591 3347 ntBASIC15.73■□□□□ 0.11
CDH12P55289 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH12P55289 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CDH12P55289 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDH12P55289 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH12P55289 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDH12P55289 AC148477.5-201ENST00000625164 1645 ntBASIC15.72■□□□□ 0.11
CDH12P55289 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH12P55289 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH12P55289 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH12P55289 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CDH12P55289 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH12P55289 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH12P55289 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH12P55289 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH12P55289 AC012615.1-201ENST00000565797 1299 ntBASIC15.72■□□□□ 0.11
CDH12P55289 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 AC092119.3-201ENST00000612618 583 ntBASIC15.72■□□□□ 0.11
CDH12P55289 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH12P55289 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH12P55289 PAUPAR-201ENST00000630360 2965 ntBASIC15.72■□□□□ 0.11
CDH12P55289 AP000867.4-201ENST00000641616 219 ntBASIC15.72■□□□□ 0.11
CDH12P55289 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDH12P55289 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.72■□□□□ 0.11
CDH12P55289 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH12P55289 AC022188.1-201ENST00000620960 1664 ntBASIC15.72■□□□□ 0.11
CDH12P55289 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 TSPY26P-202ENST00000565928 3884 ntBASIC15.72■□□□□ 0.11
CDH12P55289 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH12P55289 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH12P55289 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDH12P55289 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH12P55289 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH12P55289 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH12P55289 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms