Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATN1P54259 AC092552.1-201ENST00000547243 906 ntBASIC18.42■□□□□ 0.54
ATN1P54259 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
ATN1P54259 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC18.42■□□□□ 0.54
ATN1P54259 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.42■□□□□ 0.54
ATN1P54259 MIR4259-201ENST00000584466 101 ntBASIC18.42■□□□□ 0.54
ATN1P54259 AC084346.2-201ENST00000607097 949 ntBASIC18.42■□□□□ 0.54
ATN1P54259 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.42■□□□□ 0.54
ATN1P54259 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATN1P54259 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.42■□□□□ 0.54
ATN1P54259 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.42■□□□□ 0.54
ATN1P54259 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATN1P54259 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATN1P54259 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATN1P54259 BX323043.1-201ENST00000641006 1765 ntBASIC18.42■□□□□ 0.54
ATN1P54259 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATN1P54259 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ATN1P54259 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATN1P54259 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATN1P54259 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.42■□□□□ 0.54
ATN1P54259 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.42■□□□□ 0.54
ATN1P54259 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATN1P54259 AC022762.2-201ENST00000600308 1353 ntBASIC18.42■□□□□ 0.54
ATN1P54259 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.41■□□□□ 0.54
ATN1P54259 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ATN1P54259 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ATN1P54259 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.41■□□□□ 0.54
ATN1P54259 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ATN1P54259 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ATN1P54259 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.41■□□□□ 0.54
ATN1P54259 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ATN1P54259 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.41■□□□□ 0.54
ATN1P54259 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.41■□□□□ 0.54
ATN1P54259 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.41■□□□□ 0.54
ATN1P54259 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.41■□□□□ 0.54
ATN1P54259 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 BANF1P1-201ENST00000553684 263 ntBASIC18.41■□□□□ 0.54
ATN1P54259 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.41■□□□□ 0.54
ATN1P54259 AL079307.3-201ENST00000556114 283 ntBASIC18.41■□□□□ 0.54
ATN1P54259 AC106886.1-201ENST00000568660 600 ntBASIC18.41■□□□□ 0.54
ATN1P54259 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
ATN1P54259 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.41■□□□□ 0.54
ATN1P54259 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 AC093503.3-201ENST00000624917 2352 ntBASIC18.41■□□□□ 0.54
ATN1P54259 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.41■□□□□ 0.54
ATN1P54259 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.41■□□□□ 0.54
ATN1P54259 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATN1P54259 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
ATN1P54259 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
ATN1P54259 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATN1P54259 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATN1P54259 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ATN1P54259 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATN1P54259 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ATN1P54259 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
ATN1P54259 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATN1P54259 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATN1P54259 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.4■□□□□ 0.54
ATN1P54259 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATN1P54259 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.4■□□□□ 0.54
ATN1P54259 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATN1P54259 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATN1P54259 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATN1P54259 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.4■□□□□ 0.54
ATN1P54259 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.4■□□□□ 0.54
ATN1P54259 TTTY23B-201ENST00000442790 549 ntBASIC18.4■□□□□ 0.54
ATN1P54259 MTND2P25-201ENST00000449028 610 ntBASIC18.4■□□□□ 0.54
ATN1P54259 RN7SL837P-201ENST00000463010 287 ntBASIC18.4■□□□□ 0.54
ATN1P54259 SPDYE18-201ENST00000510091 1050 ntBASIC18.4■□□□□ 0.54
ATN1P54259 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATN1P54259 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ATN1P54259 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ATN1P54259 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.4■□□□□ 0.54
ATN1P54259 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.4■□□□□ 0.54
ATN1P54259 SPTSSB-204ENST00000617024 1292 ntBASIC18.4■□□□□ 0.54
ATN1P54259 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.4■□□□□ 0.54
ATN1P54259 AL033527.4-201ENST00000641026 673 ntBASIC18.4■□□□□ 0.54
ATN1P54259 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms