Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
RNF144AP50876 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RNF144AP50876 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF144AP50876 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.68■□□□□ 0.1
RNF144AP50876 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF144AP50876 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF144AP50876 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.68■□□□□ 0.1
RNF144AP50876 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.68■□□□□ 0.1
RNF144AP50876 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF144AP50876 AL589182.2-201ENST00000619332 1049 ntBASIC15.68■□□□□ 0.1
RNF144AP50876 AC004706.3-202ENST00000621574 984 ntBASIC15.68■□□□□ 0.1
RNF144AP50876 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 AL645728.1-201ENST00000366221 2101 ntBASIC15.68■□□□□ 0.1
RNF144AP50876 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF144AP50876 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNF144AP50876 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF144AP50876 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF144AP50876 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF144AP50876 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF144AP50876 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
RNF144AP50876 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 AC004870.1-201ENST00000315132 882 ntBASIC15.67■□□□□ 0.1
RNF144AP50876 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF144AP50876 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RNF144AP50876 AC124947.2-201ENST00000547118 1133 ntBASIC15.67■□□□□ 0.1
RNF144AP50876 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF144AP50876 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF144AP50876 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RNF144AP50876 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF144AP50876 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF144AP50876 PI4KAP1-204ENST00000612579 1703 ntBASIC15.67■□□□□ 0.1
RNF144AP50876 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 AL603756.1-201ENST00000606511 2163 ntBASIC15.67■□□□□ 0.1
RNF144AP50876 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF144AP50876 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF144AP50876 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF144AP50876 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF144AP50876 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF144AP50876 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF144AP50876 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF144AP50876 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms