Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.73■□□□□ 0.43
TUBP50607 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TUBP50607 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBP50607 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TUBP50607 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TUBP50607 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TUBP50607 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TUBP50607 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBP50607 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBP50607 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.72■□□□□ 0.43
TUBP50607 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.72■□□□□ 0.43
TUBP50607 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.72■□□□□ 0.43
TUBP50607 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TUBP50607 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBP50607 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.72■□□□□ 0.43
TUBP50607 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBP50607 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBP50607 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TUBP50607 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 ELL2P1-201ENST00000413990 1906 ntBASIC17.72■□□□□ 0.43
TUBP50607 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.72■□□□□ 0.43
TUBP50607 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBP50607 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TUBP50607 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBP50607 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBP50607 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.71■□□□□ 0.43
TUBP50607 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.71■□□□□ 0.43
TUBP50607 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.71■□□□□ 0.43
TUBP50607 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.71■□□□□ 0.43
TUBP50607 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.71■□□□□ 0.43
TUBP50607 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 MIR4469-201ENST00000583919 79 ntBASIC17.71■□□□□ 0.43
TUBP50607 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.71■□□□□ 0.43
TUBP50607 LINC02012-201ENST00000608206 1725 ntBASIC17.71■□□□□ 0.43
TUBP50607 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TUBP50607 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TUBP50607 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBP50607 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBP50607 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
TUBP50607 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TUBP50607 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TUBP50607 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.7■□□□□ 0.42
TUBP50607 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TUBP50607 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms