Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A1P43005 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC1A1P43005 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC1A1P43005 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC1A1P43005 AC021087.4-201ENST00000563761 564 ntBASIC17.6■□□□□ 0.41
SLC1A1P43005 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC1A1P43005 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC1A1P43005 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC1A1P43005 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SLC1A1P43005 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC1A1P43005 AC006504.4-201ENST00000592118 1568 ntBASIC17.6■□□□□ 0.41
SLC1A1P43005 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 AC131009.4-201ENST00000624048 1740 ntBASIC17.6■□□□□ 0.41
SLC1A1P43005 AL512652.2-201ENST00000625156 1716 ntBASIC17.6■□□□□ 0.41
SLC1A1P43005 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SLC1A1P43005 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC1A1P43005 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SLC1A1P43005 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC1A1P43005 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A1P43005 AL671710.1-201ENST00000610245 2349 ntBASIC17.59■□□□□ 0.41
SLC1A1P43005 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A1P43005 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A1P43005 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A1P43005 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 AKR1C7P-201ENST00000305623 895 ntBASIC17.59■□□□□ 0.41
SLC1A1P43005 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC1A1P43005 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 SLC25A6P2-201ENST00000497974 877 ntBASIC17.59■□□□□ 0.41
SLC1A1P43005 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 AC107918.4-202ENST00000641623 219 ntBASIC17.59■□□□□ 0.41
SLC1A1P43005 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SLC1A1P43005 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC1A1P43005 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SLC1A1P43005 AC079328.2-201ENST00000561241 3354 ntBASIC17.59■□□□□ 0.41
SLC1A1P43005 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC1A1P43005 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC1A1P43005 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A1P43005 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A1P43005 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.58■□□□□ 0.41
SLC1A1P43005 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A1P43005 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A1P43005 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A1P43005 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.58■□□□□ 0.41
SLC1A1P43005 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A1P43005 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC1A1P43005 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
SLC1A1P43005 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A1P43005 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A1P43005 AL353732.1-201ENST00000569618 1459 ntBASIC17.58■□□□□ 0.41
SLC1A1P43005 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.58■□□□□ 0.41
SLC1A1P43005 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A1P43005 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SLC1A1P43005 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SLC1A1P43005 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC1A1P43005 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms