Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.05■□□□□ 0.32
HADHAP40939 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.05■□□□□ 0.32
HADHAP40939 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.05■□□□□ 0.32
HADHAP40939 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
HADHAP40939 AC105339.3-201ENST00000560043 636 ntBASIC17.05■□□□□ 0.32
HADHAP40939 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.05■□□□□ 0.32
HADHAP40939 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.05■□□□□ 0.32
HADHAP40939 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HADHAP40939 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HADHAP40939 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HADHAP40939 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HADHAP40939 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HADHAP40939 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.05■□□□□ 0.32
HADHAP40939 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HADHAP40939 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HADHAP40939 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HADHAP40939 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.04■□□□□ 0.32
HADHAP40939 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 PAWRP1-201ENST00000451083 565 ntBASIC17.04■□□□□ 0.32
HADHAP40939 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.04■□□□□ 0.32
HADHAP40939 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.04■□□□□ 0.32
HADHAP40939 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.04■□□□□ 0.32
HADHAP40939 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.04■□□□□ 0.32
HADHAP40939 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 GGTLC5P-201ENST00000617623 998 ntBASIC17.04■□□□□ 0.32
HADHAP40939 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HADHAP40939 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.04■□□□□ 0.32
HADHAP40939 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 PKD1P5-201ENST00000532415 10291 ntBASIC17.04■□□□□ 0.32
HADHAP40939 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.04■□□□□ 0.32
HADHAP40939 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 PI4KAP1-204ENST00000612579 1703 ntBASIC17.04■□□□□ 0.32
HADHAP40939 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HADHAP40939 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HADHAP40939 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HADHAP40939 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.03■□□□□ 0.32
HADHAP40939 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.03■□□□□ 0.32
HADHAP40939 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HADHAP40939 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 AC073621.1-201ENST00000392730 636 ntBASIC17.03■□□□□ 0.32
HADHAP40939 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 HNRNPDP1-201ENST00000439535 754 ntBASIC17.03■□□□□ 0.32
HADHAP40939 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 AL662844.1-201ENST00000546340 181 ntBASIC17.03■□□□□ 0.32
HADHAP40939 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.03■□□□□ 0.32
HADHAP40939 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.03■□□□□ 0.32
HADHAP40939 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
HADHAP40939 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.03■□□□□ 0.32
HADHAP40939 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HADHAP40939 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
HADHAP40939 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HADHAP40939 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.02■□□□□ 0.32
HADHAP40939 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms