Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.47■□□□□ 0.07
SHC1P29353 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
SHC1P29353 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.47■□□□□ 0.07
SHC1P29353 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.47■□□□□ 0.07
SHC1P29353 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.47■□□□□ 0.07
SHC1P29353 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.47■□□□□ 0.07
SHC1P29353 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.47■□□□□ 0.07
SHC1P29353 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHC1P29353 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SHC1P29353 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SHC1P29353 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHC1P29353 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.46■□□□□ 0.07
SHC1P29353 GPR89P-201ENST00000407924 1495 ntBASIC15.46■□□□□ 0.07
SHC1P29353 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.46■□□□□ 0.07
SHC1P29353 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.46■□□□□ 0.07
SHC1P29353 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
SHC1P29353 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SHC1P29353 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.46■□□□□ 0.07
SHC1P29353 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.46■□□□□ 0.07
SHC1P29353 RPS15P9-201ENST00000494093 319 ntBASIC15.46■□□□□ 0.07
SHC1P29353 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.46■□□□□ 0.07
SHC1P29353 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.46■□□□□ 0.07
SHC1P29353 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.46■□□□□ 0.07
SHC1P29353 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.46■□□□□ 0.07
SHC1P29353 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.46■□□□□ 0.07
SHC1P29353 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.46■□□□□ 0.07
SHC1P29353 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.46■□□□□ 0.07
SHC1P29353 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.46■□□□□ 0.07
SHC1P29353 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.46■□□□□ 0.07
SHC1P29353 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHC1P29353 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SHC1P29353 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SHC1P29353 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
SHC1P29353 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SHC1P29353 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SHC1P29353 LINC02012-201ENST00000608206 1725 ntBASIC15.46■□□□□ 0.06
SHC1P29353 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
SHC1P29353 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
SHC1P29353 PCDHA1-201ENST00000378133 2726 ntBASIC15.45■□□□□ 0.06
SHC1P29353 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 FER1L4-210ENST00000615531 5998 ntBASIC15.45■□□□□ 0.06
SHC1P29353 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.45■□□□□ 0.06
SHC1P29353 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SHC1P29353 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.45■□□□□ 0.06
SHC1P29353 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.45■□□□□ 0.06
SHC1P29353 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.45■□□□□ 0.06
SHC1P29353 AL590627.1-203ENST00000421194 1026 ntBASIC15.45■□□□□ 0.06
SHC1P29353 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.45■□□□□ 0.06
SHC1P29353 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.45■□□□□ 0.06
SHC1P29353 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.45■□□□□ 0.06
SHC1P29353 AC093909.1-201ENST00000504731 1122 ntBASIC15.45■□□□□ 0.06
SHC1P29353 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 IGHV3-22-201ENST00000520721 359 ntBASIC15.45■□□□□ 0.06
SHC1P29353 SLC25A1P1-201ENST00000528351 927 ntBASIC15.45■□□□□ 0.06
SHC1P29353 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
SHC1P29353 MIR1199-201ENST00000621445 119 ntBASIC15.45■□□□□ 0.06
SHC1P29353 AL805961.1-202ENST00000641562 540 ntBASIC15.45■□□□□ 0.06
SHC1P29353 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SHC1P29353 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.45■□□□□ 0.06
SHC1P29353 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.45■□□□□ 0.06
SHC1P29353 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SHC1P29353 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.45■□□□□ 0.06
SHC1P29353 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SHC1P29353 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
SHC1P29353 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.45■□□□□ 0.06
SHC1P29353 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHC1P29353 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.45■□□□□ 0.06
SHC1P29353 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.44■□□□□ 0.06
SHC1P29353 IL9RP2-201ENST00000423948 1312 ntBASIC15.44■□□□□ 0.06
SHC1P29353 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHC1P29353 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHC1P29353 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SHC1P29353 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SHC1P29353 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.44■□□□□ 0.06
SHC1P29353 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms