Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2AP24928 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2AP24928 AC120498.9-201ENST00000339021 3867 ntBASIC19.41■□□□□ 0.7
POLR2AP24928 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2AP24928 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
POLR2AP24928 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2AP24928 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR2AP24928 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2AP24928 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2AP24928 AC108725.1-201ENST00000495472 409 ntBASIC19.41■□□□□ 0.7
POLR2AP24928 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
POLR2AP24928 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2AP24928 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.41■□□□□ 0.7
POLR2AP24928 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.41■□□□□ 0.7
POLR2AP24928 AL033527.5-201ENST00000641382 801 ntBASIC19.41■□□□□ 0.7
POLR2AP24928 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
POLR2AP24928 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2AP24928 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
POLR2AP24928 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2AP24928 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2AP24928 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
POLR2AP24928 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
POLR2AP24928 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
POLR2AP24928 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2AP24928 MIR1247-201ENST00000408206 136 ntBASIC19.4■□□□□ 0.7
POLR2AP24928 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.4■□□□□ 0.7
POLR2AP24928 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR2AP24928 AC099548.2-209ENST00000480264 625 ntBASIC19.4■□□□□ 0.7
POLR2AP24928 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR2AP24928 AC093726.1-201ENST00000608064 963 ntBASIC19.4■□□□□ 0.7
POLR2AP24928 AL391069.4-201ENST00000609583 481 ntBASIC19.4■□□□□ 0.7
POLR2AP24928 MIR8072-201ENST00000614241 80 ntBASIC19.4■□□□□ 0.7
POLR2AP24928 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2AP24928 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2AP24928 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2AP24928 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.4■□□□□ 0.7
POLR2AP24928 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2AP24928 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
POLR2AP24928 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
POLR2AP24928 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.39■□□□□ 0.7
POLR2AP24928 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2AP24928 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2AP24928 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.39■□□□□ 0.7
POLR2AP24928 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2AP24928 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
POLR2AP24928 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.39■□□□□ 0.7
POLR2AP24928 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2AP24928 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
POLR2AP24928 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.39■□□□□ 0.7
POLR2AP24928 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.39■□□□□ 0.7
POLR2AP24928 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.39■□□□□ 0.7
POLR2AP24928 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
POLR2AP24928 KRT8P44-201ENST00000441609 1350 ntBASIC19.39■□□□□ 0.69
POLR2AP24928 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2AP24928 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
POLR2AP24928 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.39■□□□□ 0.69
POLR2AP24928 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2AP24928 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.39■□□□□ 0.69
POLR2AP24928 SERBP1P3-201ENST00000459980 809 ntBASIC19.39■□□□□ 0.69
POLR2AP24928 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.39■□□□□ 0.69
POLR2AP24928 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.39■□□□□ 0.69
POLR2AP24928 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2AP24928 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2AP24928 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
POLR2AP24928 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2AP24928 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2AP24928 TUBB8P12-201ENST00000308911 1335 ntBASIC19.38■□□□□ 0.69
POLR2AP24928 TUBB7P-202ENST00000428444 1305 ntBASIC19.38■□□□□ 0.69
POLR2AP24928 TUBB8P7-204ENST00000567960 1332 ntBASIC19.38■□□□□ 0.69
POLR2AP24928 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2AP24928 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2AP24928 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.38■□□□□ 0.69
POLR2AP24928 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2AP24928 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR2AP24928 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.38■□□□□ 0.69
POLR2AP24928 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.38■□□□□ 0.69
POLR2AP24928 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2AP24928 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.38■□□□□ 0.69
POLR2AP24928 AL133338.1-201ENST00000565695 1517 ntBASIC19.38■□□□□ 0.69
POLR2AP24928 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2AP24928 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2AP24928 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
POLR2AP24928 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2AP24928 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR2AP24928 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR2AP24928 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.37■□□□□ 0.69
POLR2AP24928 ZNF767P-206ENST00000513792 565 ntBASIC19.37■□□□□ 0.69
POLR2AP24928 SDHAP3-202ENST00000515467 728 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms