Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KCNA3P22001 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KCNA3P22001 AL671710.1-201ENST00000610245 2349 ntBASIC20.33■□□□□ 0.85
KCNA3P22001 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNA3P22001 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.33■□□□□ 0.85
KCNA3P22001 AC012317.2-201ENST00000623305 2251 ntBASIC20.33■□□□□ 0.85
KCNA3P22001 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNA3P22001 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNA3P22001 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
KCNA3P22001 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.33■□□□□ 0.85
KCNA3P22001 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
KCNA3P22001 AC093503.3-201ENST00000624917 2352 ntBASIC20.33■□□□□ 0.85
KCNA3P22001 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KCNA3P22001 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNA3P22001 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNA3P22001 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.33■□□□□ 0.85
KCNA3P22001 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.33■□□□□ 0.85
KCNA3P22001 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KCNA3P22001 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
KCNA3P22001 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.33■□□□□ 0.85
KCNA3P22001 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
KCNA3P22001 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.33■□□□□ 0.85
KCNA3P22001 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.33■□□□□ 0.85
KCNA3P22001 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.33■□□□□ 0.85
KCNA3P22001 AC092337.1-201ENST00000568699 1129 ntBASIC20.33■□□□□ 0.85
KCNA3P22001 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KCNA3P22001 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KCNA3P22001 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.33■□□□□ 0.84
KCNA3P22001 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KCNA3P22001 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.33■□□□□ 0.84
KCNA3P22001 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KCNA3P22001 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.32■□□□□ 0.84
KCNA3P22001 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KCNA3P22001 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 AC090164.3-201ENST00000610780 2143 ntBASIC20.32■□□□□ 0.84
KCNA3P22001 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNA3P22001 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNA3P22001 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNA3P22001 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
KCNA3P22001 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.32■□□□□ 0.84
KCNA3P22001 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNA3P22001 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.32■□□□□ 0.84
KCNA3P22001 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 RRP7BP-205ENST00000566851 833 ntBASIC20.32■□□□□ 0.84
KCNA3P22001 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.32■□□□□ 0.84
KCNA3P22001 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNA3P22001 AC010319.3-201ENST00000597028 470 ntBASIC20.32■□□□□ 0.84
KCNA3P22001 AC244093.1-201ENST00000610837 814 ntBASIC20.32■□□□□ 0.84
KCNA3P22001 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.32■□□□□ 0.84
KCNA3P22001 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.32■□□□□ 0.84
KCNA3P22001 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNA3P22001 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNA3P22001 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 AC133963.1-201ENST00000504166 1679 ntBASIC20.32■□□□□ 0.84
KCNA3P22001 AL138781.2-201ENST00000617896 1843 ntBASIC20.32■□□□□ 0.84
KCNA3P22001 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.32■□□□□ 0.84
KCNA3P22001 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNA3P22001 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.32■□□□□ 0.84
KCNA3P22001 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KCNA3P22001 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KCNA3P22001 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KCNA3P22001 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 AC099336.1-201ENST00000417053 1171 ntBASIC20.31■□□□□ 0.84
KCNA3P22001 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.31■□□□□ 0.84
KCNA3P22001 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
KCNA3P22001 PDIA3P1-201ENST00000471856 1510 ntBASIC20.31■□□□□ 0.84
KCNA3P22001 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA3P22001 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNA3P22001 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KCNA3P22001 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KCNA3P22001 TUBB1P2-201ENST00000422712 1306 ntBASIC20.3■□□□□ 0.84
KCNA3P22001 TUBB1P1-201ENST00000503144 1300 ntBASIC20.3■□□□□ 0.84
KCNA3P22001 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA3P22001 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KCNA3P22001 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms