Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.97■□□□□ 0.31
VCLP18206 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
VCLP18206 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.97■□□□□ 0.31
VCLP18206 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 LINC02012-201ENST00000608206 1725 ntBASIC16.97■□□□□ 0.31
VCLP18206 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VCLP18206 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.97■□□□□ 0.31
VCLP18206 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.97■□□□□ 0.31
VCLP18206 AC098831.1-202ENST00000438821 336 ntBASIC16.97■□□□□ 0.31
VCLP18206 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.97■□□□□ 0.31
VCLP18206 AC012640.2-201ENST00000561606 901 ntBASIC16.97■□□□□ 0.31
VCLP18206 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.97■□□□□ 0.31
VCLP18206 AL353135.1-201ENST00000606729 504 ntBASIC16.97■□□□□ 0.31
VCLP18206 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 PCDHB17P-201ENST00000539533 2393 ntBASIC16.97■□□□□ 0.31
VCLP18206 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.97■□□□□ 0.31
VCLP18206 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VCLP18206 GPR89P-201ENST00000407924 1495 ntBASIC16.97■□□□□ 0.31
VCLP18206 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.97■□□□□ 0.31
VCLP18206 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.97■□□□□ 0.31
VCLP18206 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
VCLP18206 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
VCLP18206 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCLP18206 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VCLP18206 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.96■□□□□ 0.31
VCLP18206 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VCLP18206 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VCLP18206 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.96■□□□□ 0.31
VCLP18206 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.96■□□□□ 0.31
VCLP18206 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VCLP18206 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.96■□□□□ 0.31
VCLP18206 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 SLC25A1P3-201ENST00000395415 828 ntBASIC16.96■□□□□ 0.31
VCLP18206 AL022342.1-201ENST00000400363 863 ntBASIC16.96■□□□□ 0.31
VCLP18206 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.96■□□□□ 0.31
VCLP18206 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.96■□□□□ 0.31
VCLP18206 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.96■□□□□ 0.31
VCLP18206 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.96■□□□□ 0.31
VCLP18206 ZNF259P1-201ENST00000407656 1365 ntBASIC16.96■□□□□ 0.31
VCLP18206 AP002414.3-201ENST00000589352 1468 ntBASIC16.96■□□□□ 0.31
VCLP18206 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VCLP18206 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VCLP18206 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VCLP18206 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.96■□□□□ 0.31
VCLP18206 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCLP18206 AC068418.2-201ENST00000577309 3703 ntBASIC16.96■□□□□ 0.31
VCLP18206 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VCLP18206 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
VCLP18206 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.96■□□□□ 0.3
VCLP18206 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VCLP18206 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VCLP18206 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VCLP18206 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
VCLP18206 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VCLP18206 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
VCLP18206 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VCLP18206 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.95■□□□□ 0.3
VCLP18206 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.95■□□□□ 0.3
VCLP18206 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.95■□□□□ 0.3
VCLP18206 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VCLP18206 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VCLP18206 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.95■□□□□ 0.3
VCLP18206 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms