Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC080080.1-201ENST00000625121 2420 ntBASIC17.76■□□□□ 0.43
PTPN1P18031 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN1P18031 AP006288.1-201ENST00000446065 395 ntBASIC17.76■□□□□ 0.43
PTPN1P18031 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.76■□□□□ 0.43
PTPN1P18031 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN1P18031 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTPN1P18031 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PTPN1P18031 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.76■□□□□ 0.43
PTPN1P18031 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTPN1P18031 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN1P18031 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN1P18031 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN1P18031 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN1P18031 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN1P18031 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTPN1P18031 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN1P18031 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN1P18031 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTPN1P18031 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN1P18031 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 AL355306.1-201ENST00000415580 579 ntBASIC17.75■□□□□ 0.43
PTPN1P18031 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
PTPN1P18031 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN1P18031 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.75■□□□□ 0.43
PTPN1P18031 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN1P18031 DNAJB3-202ENST00000449667 1266 ntBASIC17.75■□□□□ 0.43
PTPN1P18031 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTPN1P18031 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.75■□□□□ 0.43
PTPN1P18031 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN1P18031 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.75■□□□□ 0.43
PTPN1P18031 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.75■□□□□ 0.43
PTPN1P18031 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.75■□□□□ 0.43
PTPN1P18031 AC079781.4-201ENST00000641908 219 ntBASIC17.75■□□□□ 0.43
PTPN1P18031 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PTPN1P18031 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN1P18031 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PTPN1P18031 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN1P18031 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 KRT8P39-201ENST00000396270 1433 ntBASIC17.74■□□□□ 0.43
PTPN1P18031 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PTPN1P18031 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN1P18031 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PTPN1P18031 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PTPN1P18031 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 ADH5P3-201ENST00000433842 1137 ntBASIC17.74■□□□□ 0.43
PTPN1P18031 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN1P18031 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 FAM86C2P-203ENST00000528684 1004 ntBASIC17.74■□□□□ 0.43
PTPN1P18031 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 AP001160.2-201ENST00000596071 487 ntBASIC17.74■□□□□ 0.43
PTPN1P18031 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN1P18031 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN1P18031 AL596442.2-201ENST00000610240 980 ntBASIC17.74■□□□□ 0.43
PTPN1P18031 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTPN1P18031 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms