Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 LINC02199-201ENST00000506655 2702 ntBASIC13.32□□□□□ -0.28
CSN3P07498 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CSN3P07498 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.32□□□□□ -0.28
CSN3P07498 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
CSN3P07498 AF186996.4-201ENST00000467186 377 ntBASIC13.32□□□□□ -0.28
CSN3P07498 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 RNPS1P1-201ENST00000507437 918 ntBASIC13.32□□□□□ -0.28
CSN3P07498 AC073648.2-201ENST00000510116 352 ntBASIC13.32□□□□□ -0.28
CSN3P07498 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.32□□□□□ -0.28
CSN3P07498 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 AL662844.1-201ENST00000546340 181 ntBASIC13.32□□□□□ -0.28
CSN3P07498 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CSN3P07498 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.32□□□□□ -0.28
CSN3P07498 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 SLC25A6P4-201ENST00000586535 553 ntBASIC13.32□□□□□ -0.28
CSN3P07498 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.32□□□□□ -0.28
CSN3P07498 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 LINC01451-201ENST00000623792 534 ntBASIC13.32□□□□□ -0.28
CSN3P07498 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 REXO1L11P-201ENST00000620964 1927 ntBASIC13.32□□□□□ -0.28
CSN3P07498 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSN3P07498 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.32□□□□□ -0.28
CSN3P07498 AC132938.5-201ENST00000624980 1813 ntBASIC13.32□□□□□ -0.28
CSN3P07498 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSN3P07498 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.31□□□□□ -0.28
CSN3P07498 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.31□□□□□ -0.28
CSN3P07498 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CSN3P07498 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CSN3P07498 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CSN3P07498 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.31□□□□□ -0.28
CSN3P07498 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.31□□□□□ -0.28
CSN3P07498 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSN3P07498 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.31□□□□□ -0.28
CSN3P07498 MYCLP1-201ENST00000372451 1075 ntBASIC13.31□□□□□ -0.28
CSN3P07498 KLF4P1-201ENST00000412782 1185 ntBASIC13.31□□□□□ -0.28
CSN3P07498 SPDYE21P-201ENST00000413323 827 ntBASIC13.31□□□□□ -0.28
CSN3P07498 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSN3P07498 KRT18P67-201ENST00000432816 1264 ntBASIC13.31□□□□□ -0.28
CSN3P07498 BX005266.1-201ENST00000473402 457 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms