Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.18□□□□□ -0.14
CD74P04233 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.18□□□□□ -0.14
CD74P04233 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CD74P04233 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.18□□□□□ -0.14
CD74P04233 AC008550.1-201ENST00000511500 884 ntBASIC14.18□□□□□ -0.14
CD74P04233 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CD74P04233 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.18□□□□□ -0.14
CD74P04233 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.18□□□□□ -0.14
CD74P04233 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.18□□□□□ -0.14
CD74P04233 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 AC013268.4-201ENST00000637413 2228 ntBASIC14.18□□□□□ -0.14
CD74P04233 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CD74P04233 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD74P04233 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD74P04233 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD74P04233 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.17□□□□□ -0.14
CD74P04233 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.17□□□□□ -0.14
CD74P04233 ACTG1P4-201ENST00000425123 1122 ntBASIC14.17□□□□□ -0.14
CD74P04233 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.17□□□□□ -0.14
CD74P04233 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.17□□□□□ -0.14
CD74P04233 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.17□□□□□ -0.14
CD74P04233 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.17□□□□□ -0.14
CD74P04233 AD001527.2-201ENST00000622994 785 ntBASIC14.17□□□□□ -0.14
CD74P04233 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 AP006294.2-201ENST00000641667 209 ntBASIC14.17□□□□□ -0.14
CD74P04233 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CD74P04233 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD74P04233 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.17□□□□□ -0.14
CD74P04233 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD74P04233 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD74P04233 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.16□□□□□ -0.14
CD74P04233 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD74P04233 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CD74P04233 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 Z83836.1-201ENST00000624605 1642 ntBASIC14.16□□□□□ -0.14
CD74P04233 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.16□□□□□ -0.14
CD74P04233 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.16□□□□□ -0.14
CD74P04233 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.16□□□□□ -0.14
CD74P04233 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.16□□□□□ -0.14
CD74P04233 AC005336.2-201ENST00000593183 939 ntBASIC14.16□□□□□ -0.14
CD74P04233 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.16□□□□□ -0.14
CD74P04233 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.16□□□□□ -0.14
CD74P04233 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms