Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 AC138028.4-201ENST00000564984 1845 ntBASIC10.29□□□□□ -0.76
APOBP04114 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC10.29□□□□□ -0.76
APOBP04114 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC10.29□□□□□ -0.76
APOBP04114 AC068587.3-201ENST00000526613 355 ntBASIC10.29□□□□□ -0.76
APOBP04114 RIT1-205ENST00000539040 919 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC10.29□□□□□ -0.76
APOBP04114 DERL2-202ENST00000570848 657 ntTSL 5 BASIC10.29□□□□□ -0.76
APOBP04114 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC10.29□□□□□ -0.76
APOBP04114 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 AC093525.9-201ENST00000624961 1746 ntBASIC10.29□□□□□ -0.76
APOBP04114 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 AC092053.1-201ENST00000605787 1936 ntBASIC10.29□□□□□ -0.76
APOBP04114 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.29□□□□□ -0.76
APOBP04114 GOLGA2P4-201ENST00000441462 777 ntBASIC10.29□□□□□ -0.76
APOBP04114 AGER-214ENST00000538695 487 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 KRT90P-201ENST00000549264 1064 ntBASIC10.29□□□□□ -0.76
APOBP04114 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
APOBP04114 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
APOBP04114 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 STX1A-203ENST00000395155 783 ntTSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.28□□□□□ -0.76
APOBP04114 GNRHR2-203ENST00000581100 1187 ntBASIC10.28□□□□□ -0.76
APOBP04114 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC10.28□□□□□ -0.76
APOBP04114 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 MIR326-201ENST00000362220 95 ntBASIC10.28□□□□□ -0.76
APOBP04114 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
APOBP04114 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
APOBP04114 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 AP001258.2-201ENST00000529891 490 ntBASIC10.28□□□□□ -0.76
APOBP04114 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 AP001350.2-201ENST00000625104 1094 ntBASIC10.28□□□□□ -0.76
APOBP04114 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC10.28□□□□□ -0.76
APOBP04114 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
APOBP04114 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC10.28□□□□□ -0.76
APOBP04114 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC10.28□□□□□ -0.76
APOBP04114 MNT-208ENST00000575394 606 ntTSL 4 BASIC10.28□□□□□ -0.76
APOBP04114 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.28□□□□□ -0.76
APOBP04114 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.28□□□□□ -0.76
APOBP04114 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC10.28□□□□□ -0.76
APOBP04114 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.28□□□□□ -0.76
APOBP04114 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOBP04114 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC10.28□□□□□ -0.76
APOBP04114 RPL13AP20-201ENST00000459725 609 ntBASIC10.28□□□□□ -0.76
APOBP04114 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC10.28□□□□□ -0.76
APOBP04114 CLUHP6-201ENST00000580789 941 ntBASIC10.28□□□□□ -0.76
APOBP04114 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC10.27□□□□□ -0.76
APOBP04114 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
APOBP04114 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
APOBP04114 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC10.27□□□□□ -0.76
APOBP04114 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC10.27□□□□□ -0.76
APOBP04114 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC10.27□□□□□ -0.76
APOBP04114 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC10.27□□□□□ -0.76
APOBP04114 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
APOBP04114 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
APOBP04114 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
APOBP04114 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC10.27□□□□□ -0.77
APOBP04114 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOBP04114 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms