Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MIR940-201ENST00000401276 94 ntBASIC18.07■□□□□ 0.48
HLA-DRAP01903 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.07■□□□□ 0.48
HLA-DRAP01903 RNA5SP416-201ENST00000516838 111 ntBASIC18.07■□□□□ 0.48
HLA-DRAP01903 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
HLA-DRAP01903 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.07■□□□□ 0.48
HLA-DRAP01903 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DRAP01903 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DRAP01903 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 AC006538.1-201ENST00000567905 1585 ntBASIC18.07■□□□□ 0.48
HLA-DRAP01903 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 HLA-J-202ENST00000469281 1241 ntBASIC18.06■□□□□ 0.48
HLA-DRAP01903 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 AL031432.2-201ENST00000566714 459 ntBASIC18.06■□□□□ 0.48
HLA-DRAP01903 AL928711.1-201ENST00000570165 459 ntBASIC18.06■□□□□ 0.48
HLA-DRAP01903 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 AL671883.3-201ENST00000603274 991 ntBASIC18.06■□□□□ 0.48
HLA-DRAP01903 AC023141.13-201ENST00000604991 943 ntBASIC18.06■□□□□ 0.48
HLA-DRAP01903 AC007064.4-201ENST00000637740 555 ntBASIC18.06■□□□□ 0.48
HLA-DRAP01903 AL645728.2-201ENST00000641974 660 ntBASIC18.06■□□□□ 0.48
HLA-DRAP01903 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 KRT8P39-201ENST00000396270 1433 ntBASIC18.06■□□□□ 0.48
HLA-DRAP01903 AC025580.3-201ENST00000617932 1424 ntBASIC18.06■□□□□ 0.48
HLA-DRAP01903 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRAP01903 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DRAP01903 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 AC084018.2-201ENST00000613093 2607 ntBASIC18.05■□□□□ 0.48
HLA-DRAP01903 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 KRT19P2-202ENST00000557173 1012 ntBASIC18.05■□□□□ 0.48
HLA-DRAP01903 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 AL512652.2-201ENST00000625156 1716 ntBASIC18.05■□□□□ 0.48
HLA-DRAP01903 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRAP01903 AC099398.1-201ENST00000567919 2776 ntBASIC18.05■□□□□ 0.48
HLA-DRAP01903 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 PCDHA14-201ENST00000506751 2298 ntBASIC18.05■□□□□ 0.48
HLA-DRAP01903 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DRAP01903 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms