Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 C2orf69P2-201ENST00000562032 1123 ntBASIC24.79■■□□□ 1.56
RAPGEF3O95398 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC24.79■■□□□ 1.56
RAPGEF3O95398 AC243960.2-201ENST00000600996 747 ntBASIC24.79■■□□□ 1.56
RAPGEF3O95398 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC24.79■■□□□ 1.56
RAPGEF3O95398 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC24.79■■□□□ 1.56
RAPGEF3O95398 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RAPGEF3O95398 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC24.79■■□□□ 1.56
RAPGEF3O95398 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RAPGEF3O95398 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF3O95398 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF3O95398 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF3O95398 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF3O95398 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 PPA1-206ENST00000625364 644 ntTSL 5 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
RAPGEF3O95398 AP000974.1-201ENST00000623909 2387 ntBASIC24.78■■□□□ 1.56
RAPGEF3O95398 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 NME9-203ENST00000383180 2133 ntTSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 STX6-204ENST00000542060 4809 ntTSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 FAM21FP-201ENST00000426241 1131 ntBASIC24.77■■□□□ 1.56
RAPGEF3O95398 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 RN7SL190P-201ENST00000582519 257 ntBASIC24.77■■□□□ 1.56
RAPGEF3O95398 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF3O95398 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC24.77■■□□□ 1.56
RAPGEF3O95398 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF3O95398 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.76■■□□□ 1.55
RAPGEF3O95398 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC24.76■■□□□ 1.55
RAPGEF3O95398 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF3O95398 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF3O95398 AC104596.2-201ENST00000512793 793 ntBASIC24.76■■□□□ 1.55
RAPGEF3O95398 APRT-204ENST00000563655 709 ntTSL 5 BASIC24.76■■□□□ 1.55
RAPGEF3O95398 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC24.76■■□□□ 1.55
RAPGEF3O95398 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF3O95398 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF3O95398 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF3O95398 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF3O95398 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF3O95398 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC24.76■■□□□ 1.55
RAPGEF3O95398 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 AC133963.1-201ENST00000504166 1679 ntBASIC24.75■■□□□ 1.55
RAPGEF3O95398 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RAPGEF3O95398 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RAPGEF3O95398 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RAPGEF3O95398 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RAPGEF3O95398 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RAPGEF3O95398 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RAPGEF3O95398 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RAPGEF3O95398 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RAPGEF3O95398 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RAPGEF3O95398 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
RAPGEF3O95398 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RAPGEF3O95398 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
RAPGEF3O95398 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RAPGEF3O95398 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC24.74■■□□□ 1.55
RAPGEF3O95398 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RAPGEF3O95398 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RAPGEF3O95398 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
RAPGEF3O95398 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms