Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 AKAP8P1-201ENST00000434743 1349 ntBASIC17.14■□□□□ 0.33
CLDN11O75508 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN11O75508 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLDN11O75508 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN11O75508 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN11O75508 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN11O75508 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
CLDN11O75508 ADH5P3-201ENST00000433842 1137 ntBASIC17.13■□□□□ 0.33
CLDN11O75508 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN11O75508 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN11O75508 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN11O75508 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN11O75508 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN11O75508 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLDN11O75508 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN11O75508 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN11O75508 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN11O75508 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN11O75508 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLDN11O75508 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLDN11O75508 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLDN11O75508 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 WASH6P-202ENST00000359512 1437 ntBASIC17.13■□□□□ 0.33
CLDN11O75508 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN11O75508 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN11O75508 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN11O75508 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN11O75508 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN11O75508 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 AC254562.1-201ENST00000417586 456 ntBASIC17.12■□□□□ 0.33
CLDN11O75508 HLA-J-202ENST00000469281 1241 ntBASIC17.12■□□□□ 0.33
CLDN11O75508 RN7SL589P-201ENST00000481268 310 ntBASIC17.12■□□□□ 0.33
CLDN11O75508 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN11O75508 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN11O75508 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
CLDN11O75508 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLDN11O75508 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN11O75508 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN11O75508 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN11O75508 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLDN11O75508 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
CLDN11O75508 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
CLDN11O75508 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN11O75508 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN11O75508 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN11O75508 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN11O75508 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN11O75508 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN11O75508 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN11O75508 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN11O75508 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDN11O75508 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN11O75508 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN11O75508 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN11O75508 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN11O75508 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN11O75508 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN11O75508 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN11O75508 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN11O75508 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN11O75508 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms