Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.09■□□□□ 0.17
PCDH7O60245 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH7O60245 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.09■□□□□ 0.17
PCDH7O60245 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH7O60245 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDH7O60245 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDH7O60245 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH7O60245 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH7O60245 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 AC002310.6-201ENST00000624451 1377 ntBASIC16.09■□□□□ 0.17
PCDH7O60245 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH7O60245 AC006538.1-201ENST00000567905 1585 ntBASIC16.09■□□□□ 0.17
PCDH7O60245 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH7O60245 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.08■□□□□ 0.17
PCDH7O60245 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH7O60245 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH7O60245 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH7O60245 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
PCDH7O60245 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PCDH7O60245 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
PCDH7O60245 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDH7O60245 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH7O60245 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH7O60245 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDH7O60245 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH7O60245 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH7O60245 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDH7O60245 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH7O60245 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDH7O60245 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDH7O60245 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDH7O60245 DOC2GP-204ENST00000639052 2548 ntBASIC16.08■□□□□ 0.16
PCDH7O60245 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH7O60245 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH7O60245 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH7O60245 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH7O60245 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDH7O60245 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDH7O60245 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
PCDH7O60245 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH7O60245 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH7O60245 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH7O60245 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDH7O60245 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDH7O60245 KRT18P27-201ENST00000427733 1299 ntBASIC16.07■□□□□ 0.16
PCDH7O60245 RPS15P9-201ENST00000494093 319 ntBASIC16.07■□□□□ 0.16
PCDH7O60245 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH7O60245 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH7O60245 TP73-AS1-207ENST00000624167 988 ntBASIC16.07■□□□□ 0.16
PCDH7O60245 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH7O60245 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH7O60245 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH7O60245 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDH7O60245 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDH7O60245 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH7O60245 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDH7O60245 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH7O60245 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
PCDH7O60245 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH7O60245 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH7O60245 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH7O60245 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH7O60245 EMBP1-201ENST00000458200 901 ntBASIC16.06■□□□□ 0.16
PCDH7O60245 SLC25A6P2-201ENST00000497974 877 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms