Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP9BO43861 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ATP9BO43861 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.46■□□□□ 0.39
ATP9BO43861 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP9BO43861 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP9BO43861 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 KRT18P2-201ENST00000447938 1258 ntBASIC17.46■□□□□ 0.39
ATP9BO43861 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP9BO43861 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP9BO43861 AC040169.1-201ENST00000565382 521 ntBASIC17.46■□□□□ 0.39
ATP9BO43861 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP9BO43861 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP9BO43861 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP9BO43861 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
ATP9BO43861 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP9BO43861 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATP9BO43861 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.46■□□□□ 0.38
ATP9BO43861 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ATP9BO43861 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 AC092068.3-201ENST00000587894 2016 ntBASIC17.45■□□□□ 0.38
ATP9BO43861 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ATP9BO43861 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
ATP9BO43861 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
ATP9BO43861 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ATP9BO43861 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
ATP9BO43861 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP9BO43861 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 PAWRP1-201ENST00000451083 565 ntBASIC17.45■□□□□ 0.38
ATP9BO43861 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP9BO43861 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.45■□□□□ 0.38
ATP9BO43861 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP9BO43861 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 OR7E47P-204ENST00000575924 449 ntBASIC17.45■□□□□ 0.38
ATP9BO43861 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
ATP9BO43861 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATP9BO43861 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP9BO43861 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP9BO43861 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
ATP9BO43861 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATP9BO43861 EGFEM1P-202ENST00000431685 1563 ntBASIC17.45■□□□□ 0.38
ATP9BO43861 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATP9BO43861 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP9BO43861 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 BX842568.4-201ENST00000421222 227 ntBASIC17.44■□□□□ 0.38
ATP9BO43861 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.44■□□□□ 0.38
ATP9BO43861 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP9BO43861 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP9BO43861 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP9BO43861 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP9BO43861 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP9BO43861 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP9BO43861 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP9BO43861 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP9BO43861 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.44■□□□□ 0.38
ATP9BO43861 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms