Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.82■□□□□ 0.92
SRGAP3O43295 UBALD1-205ENST00000590891 2641 ntBASIC20.82■□□□□ 0.92
SRGAP3O43295 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SRGAP3O43295 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SRGAP3O43295 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SRGAP3O43295 KRT8P39-201ENST00000396270 1433 ntBASIC20.82■□□□□ 0.92
SRGAP3O43295 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRGAP3O43295 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRGAP3O43295 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRGAP3O43295 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.82■□□□□ 0.92
SRGAP3O43295 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.82■□□□□ 0.92
SRGAP3O43295 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.82■□□□□ 0.92
SRGAP3O43295 AC112191.1-201ENST00000523689 701 ntBASIC20.82■□□□□ 0.92
SRGAP3O43295 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.82■□□□□ 0.92
SRGAP3O43295 AC005829.1-201ENST00000570002 483 ntBASIC20.82■□□□□ 0.92
SRGAP3O43295 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SRGAP3O43295 AL139011.1-202ENST00000642063 584 ntBASIC20.82■□□□□ 0.92
SRGAP3O43295 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRGAP3O43295 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.82■□□□□ 0.92
SRGAP3O43295 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRGAP3O43295 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRGAP3O43295 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.82■□□□□ 0.92
SRGAP3O43295 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SRGAP3O43295 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRGAP3O43295 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRGAP3O43295 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.82■□□□□ 0.92
SRGAP3O43295 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SRGAP3O43295 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SRGAP3O43295 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SRGAP3O43295 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SRGAP3O43295 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.81■□□□□ 0.92
SRGAP3O43295 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.81■□□□□ 0.92
SRGAP3O43295 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 AC002056.1-201ENST00000395613 760 ntBASIC20.81■□□□□ 0.92
SRGAP3O43295 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.81■□□□□ 0.92
SRGAP3O43295 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.81■□□□□ 0.92
SRGAP3O43295 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.81■□□□□ 0.92
SRGAP3O43295 MKNK2P1-201ENST00000437526 628 ntBASIC20.81■□□□□ 0.92
SRGAP3O43295 AC109635.5-201ENST00000533593 962 ntBASIC20.81■□□□□ 0.92
SRGAP3O43295 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.81■□□□□ 0.92
SRGAP3O43295 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.81■□□□□ 0.92
SRGAP3O43295 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.81■□□□□ 0.92
SRGAP3O43295 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.81■□□□□ 0.92
SRGAP3O43295 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
SRGAP3O43295 AC099522.2-201ENST00000607001 744 ntBASIC20.81■□□□□ 0.92
SRGAP3O43295 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SRGAP3O43295 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
SRGAP3O43295 AC020916.1-201ENST00000587762 1774 ntBASIC20.81■□□□□ 0.92
SRGAP3O43295 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.81■□□□□ 0.92
SRGAP3O43295 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.81■□□□□ 0.92
SRGAP3O43295 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SRGAP3O43295 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.81■□□□□ 0.92
SRGAP3O43295 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.81■□□□□ 0.92
SRGAP3O43295 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRGAP3O43295 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRGAP3O43295 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRGAP3O43295 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRGAP3O43295 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRGAP3O43295 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRGAP3O43295 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.8■□□□□ 0.92
SRGAP3O43295 NKILA-202ENST00000614771 2598 ntBASIC20.8■□□□□ 0.92
SRGAP3O43295 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SRGAP3O43295 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SRGAP3O43295 PMS2P4-201ENST00000412466 1052 ntBASIC20.8■□□□□ 0.92
SRGAP3O43295 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.8■□□□□ 0.92
SRGAP3O43295 AC092474.2-201ENST00000424288 719 ntBASIC20.8■□□□□ 0.92
SRGAP3O43295 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.8■□□□□ 0.92
SRGAP3O43295 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.8■□□□□ 0.92
SRGAP3O43295 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.8■□□□□ 0.92
SRGAP3O43295 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.8■□□□□ 0.92
SRGAP3O43295 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.8■□□□□ 0.92
SRGAP3O43295 MIR3909-201ENST00000579518 119 ntBASIC20.8■□□□□ 0.92
SRGAP3O43295 AC055717.3-201ENST00000622967 595 ntBASIC20.8■□□□□ 0.92
SRGAP3O43295 AL512652.2-201ENST00000625156 1716 ntBASIC20.8■□□□□ 0.92
SRGAP3O43295 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SRGAP3O43295 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.8■□□□□ 0.92
SRGAP3O43295 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SRGAP3O43295 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SRGAP3O43295 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.8■□□□□ 0.92
SRGAP3O43295 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRGAP3O43295 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
SRGAP3O43295 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRGAP3O43295 AC092171.3-201ENST00000610122 2651 ntBASIC20.8■□□□□ 0.92
SRGAP3O43295 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.8■□□□□ 0.92
SRGAP3O43295 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.79■□□□□ 0.92
SRGAP3O43295 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SRGAP3O43295 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms